Explore the App Center

Detect megakaryocytes in IHC-stained sections, reconstruct full cell area, and quantify cell size, number of megakaryocytes containing neutrophils, and neutrophil count per megakaryocyte.

bone tissue, bone marrow, megakaryocytes, immunohistochemistry

The IHC Adipocytes+ App detects adipocytes and cellular aggregates between them. Outputs include number and area measurements for adipocytes and aggregates.

adipocytes, fat tissue, fat cells, immunohistochemistry, immune cell detection

Segment murine lung sections into tumor and non-cancerous tissue using a machine learning classifier, detect hematoxylin-stained nuclei, and quantify tumor area and marker-positive cellular phenotypes.

immunohistochemistry, lung cancer, tumor microenvironment, mouse, lung

Detect microglia soma in IHC-stained samples, segment branches, and identify primary and secondary branching points to quantify cell morphology and branching complexity.

microglia, central nervous system, peripheral nervous system, phagocytosis, astrocytes, branches

The IHC Insulin Islet App detects marker-stained insulin islets, tissue area, and cell phenotypes within and outside the islets. Outputs include tissue and islet area, cell counts, and phenotype distribution.

insulin islets, pancreas, beta-cells

The IF Swiss Roll App segments tissue into subclasses (e.g., mucosa, follicles, connective tissue), detects nuclei, and identifies phenotypes via IF stains.

mouse, colon, fluorescence, immune cell follicles

The IHC Swiss Roll App segments the tissue into subclasses (mucosa, follicles, etc.), detects nuclei, and classifies phenotypes. Outputs include tissue areas, cell counts, and phenotype distribution per region.

mouse, colon, immunohistochemistry, immune cell follicles

The Mucin Swiss Roll App segments tissue into subclasses, detects nuclei and mucin (e.g. PAS-stained), and outputs tissue areas, cell counts, and mucin area per region and overall.

mouse, colon, mucin, immune cell follicles

The Lipid Droplets App quantifies lipid droplets in H&E-stained tissues, correcting membrane artifacts and providing counts and area measurements.

liver, lipid droplets, H&E, brightfield

The IHC Adipocyte App quantifies adipocytes and their lumina in HE samples, correcting membrane artifacts and providing area measurements.

adipocytes, fat tissue, fat cells, H&E

Detect neuronal cells and reconstruct neurites/dendrites, quantify primary and secondary branches, branching points, total cell area, branch length, and branch area.

neuronal cells, microglia, central nervous system, peripheral nervous system, phagocytosis, astrocytes, branches, fluorescence

Stratify skin equivalents into dermis and epidermis, segment the stratum corneum, high/low suprabasal and basal layers, and quantify staining intensity, area, nuclei, and number/% of marker-positive cells for each layer.

dermatology, epidermis, dermis, skin, aging, oxidative UV damage, artificial skin