Checkpoint Molecules Predict Response to Immunotherapy in Cancer

FEATURED PUBLICATION

Checkpoint Molecules Predict Response to Immunotherapy in Cancer
cells

Heij et al. investigated the expression of checkpoint molecules in the tumor microenvironment of intrahepatic cholangio-carcinoma. They found that co-expression patterns of checkpoint molecules such as PD-L1 and TIGIT correlate with metastases and poor prognosis. TissueFAXS and StrataQuest were used to image the mIF-stained samples and assess protein expression.

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Community-developed Checklists Enhance Reproducibility of Microscopy Images

FEATURED PUBLICATION

Community-developed checklists for publishing images and image analyses
Nature Methods

QUAREP-LiMi is an initiative focused on promoting quality assessment and reproducibility for instruments and images in light microscopy. Dr. Rupert Ecker, CEO of TissueGnostics, participated in developing standardized guidelines for best practices in image communication. These checklists offer key recommendations on image formatting and annotation among others.

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AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma

FEATURED PUBLICATION

AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma
Cancer Biology & Medicine

To predict survival of patients with pancreatic adenocarcinoma, Zhou et al. performed an AI-assisted comprehensive analysis of CD8+ T cells, cancer stem cells (CSCs), and tumor budding (TB). They used StrataQuest image analysis software to automatically detect and quantify tumor-infiltrating CD8+ T cells, CD133+ CSCs, and CK19+ TB.

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Characterization of the Spatial Immune Context of Lung Cancer

FEATURED PUBLICATION

Characterization of the Spatial Immune Context of Lung Cancer
International Journal of Molecular Sciences

In a recent study, Imamura et al. investigated the role of debrin-expressing tumor infiltration lymphocytes (TIL) in lung cancer. The high-end image analysis solution, StrataQuest, was used for the automatic tissue classification and localization of CD3+/debrin+ cellular phenotypes in the tumor cell nest, as well as in the stroma.

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COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma

FEATURED PUBLICATION

COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma
Matrix Biology

Yan et al. investigated several collagen subtypes involved in pancreatic ductal adenocarcinoma desmoplasia. Based on this study, COL8A1 was suggested as a new marker for predicting poor chemotherapy responsiveness and survival. The TissueFAXS imaging platform and StrataQuest analysis solution were used to image and segment morphological structures.

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Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis

FEATURED PUBLICATION

Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis
cells

Savic et al. investigated the Erk 1/2 pathway role in ferroptosis induction by targeting xCT protein during the treatment of HNSCC. They found erastin to be a potent ferroptosis inducer which is strongly dependent on Erk 1/2 kinases. TissueFAXS and HistoQuest were used to image the IHC-stained samples and calculate the percentage of xCT-positive cells.

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Tumor Microenvironment Characterization of Rectal Cancer

FEATURED PUBLICATION

Case Report: Tumor Microenvironment Characterization of Rectal Cancer
Frontiers in Immunology

Song et al. published a case study investigating the genetics and tumor microenvironment of a rectal cancer patient with MSS/PD-L1-negative recurrent hepatopulmonary metastasis. TissueFAXS and StrataQuest were used to image stained tissue samples and to assess tumor infiltrating immune cells using, among others, CD4, CD8, CD163, PD1, and PD-L1 as markers.

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Adverse Effects of Single

FEATURED PUBLICATION

The impact of HIV infection on the frequencies, function, spatial localization and heterogeneity of TFRs within human lymph nodes
BMC Immunology

Mahlobo et al. published a study in BMC Immunology addressing the effect of HIV infections on frequencies, function, spatial localization and heterogeneity of T follicular regulatory cells (TFRs) in human lymph nodes. TFRs within lymph node tissues were quantified using TissueFAXS i PLUS and TissueQuest.

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Temporal changes

FEATURED PUBLICATION

Temporal changes in T cell subsets and expansion of cytotoxic CD4+ T cells in the lungs in severe COVID-19
Clinical Immunology

Kaneko et al. published a study in the Clinical Immunology journal focusing on the quantitative analysis of T-cell subset alterations in thoracic lymph nodes and lung samples of COVID-19 patients. With the help of TissueFAXS and StrataQuest, the authors were first to show the expansion of cytotoxic CD4+ T cells in the lungs of patients with severe COVID-19.

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Spatial Distribution

FEATURED PUBLICATION

Spatial distribution and functional analysis define the action pathway of Tim-3/Tim-3 ligands in tumor development
Molecular Therapy

In a recent publication in the journal Molecular Therapy, Wang et al (Cheeloo Medical College of Shandong University) combine multiplexing and TissueGnostics’ image cytometry solutions for the assessment of the expression level of Tim-3, a well-known immune checkpoint, in tumor infiltrating lymphocytes. This study nominates Tim-3 as a potential target for cancer immunotherapy.

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Multi-Antigen Imaging

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Multi-Antigen Imaging Reveals Inflammatory DC, ADAM17 and Neprilysin as Effectors in Keloid Formation
International Journal of Molecular Sciences

In a recent publication in the MDPI - International Journal of Molecular Sciences, Rath et al (University Hospital Heidelberg) combine multiplexing, TissueGnostics’ image cytometry and in-depth data mining to characterize the immune microenvironment including spatial relationships within keloid lesions. Using this approach, the authors were able to nominate potential therapeutic targets.

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SynNotch-CAR T

FEATURED PUBLICATION

SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma
Science Translational Medicine

A recent publication from the group of Choe et al. (University of California, UCSF) published in Science Translational research is exploring the therapeutic effectiveness of SynNotch-CAR T cells in a PDX glioblastoma mouse model. T cells in-situ were imaged/assessed by TissueFAXS and quantified via StrataQuest.

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CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer

FEATURED PUBLICATION

CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer
Acta Pharmaceutica Sinica B

Lin et al. investigated the UHRF1/DNMT1–MZF1 axis in the context of CpG methylation of protease serine 3, a protein with several isoforms that show paradoxical effects. To differentiate the isoforms, the researchers employed 7-marker multiplex staining and performed a quantitative analysis using TissueFAXS SPECTRA and StrataQuest.

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Customer Publications (A total of 3421 papers published)

Results 81 - 90 of 3421
81
Epstein-Barr virus (EBV) infection of endothelial cells via endocytosis is associated with a poor prognosis in nasopharyngeal carcinoma

X Chen, Z Huang, X Huang, X Yao, K Pang, X He, C Luo, Z Wie, Y Xie

Microbiology Spectrum (ASM Journals) China , 09 July 2025

Virology

Organism: Human

Tissue: Pharnyx

Pathological State: Cancer

82
Mrc1 (MMR, CD206) controls the blood proteome in reducing inflammation, age-associated organ dysfunction and mortality in sepsis

D Restagno, M Saraswat, PV Aziz, K SmithAJ Roberts, J Hintze, JD Marth

Nature Communications (Nature) USA , 07 July 2025

Neuroscience

Key words: Blood flow, Glycobiology

Organism: Mouse

Tissue: Brain

Pathological State: Sepsis

83
Bisphenol A Impairs Spatial Memory by Inhibiting Hippocampal Excitatory Neuronal Response During Learning Events

N Bi, C Huang, X Gu, R Wang, H Liu, R Zhou, H Zhang, XT Chen, HL Wang

Environment & Health (ACS Publications) China , 07 July 2025

Neuroscience

Key words: Bisphenol A, neurotoxicity, hippocampal excitatory neurons, spatial memory, neural circuits

Organism: Mouse

Tissue: Brain

84
Buyang Huanwu Decoction improves energy metabolism disorders after cerebral ischemia–reperfusion by regulating the SIRT1/AMPK signaling pathway to promote glycolysis and the tricarboxylic acid cycle

Z Hu, N Deng, Y Li, Y Bai, X Lan, T Xiong, H Ding, X Liu, C Deng

Chinese Medicine (Springer) China , 07 July 2025

Neuroscience

Key words: Qi deficiency and blood stasis syndrome, Cerebral ischemia reperfusion injury, Buyang Huanwu Decoction, Energy metabolism, Metabolomics, Glycolysis, Tricarboxylic acid cycle

Organism: Rat

Tissue: Brain

Pathological State: Ischemia

85
Endothelial cells secrete small extracellular vesicles to promote neuron endoplasmic reticulum stress injury via miR-146a-5p/Eif4g2 axis in ischemic stroke

M Jin, Y Wang, S Zhang, Y Zhang, T Liu, Y Luo, X Sun

Journal of Advanced Research (Elsevier) China , 07 July 2025

Neuroscience

Key words: Ischemic stroke, Small extracellular vesicles, miR-146a-5p, Endothelial cells, Neuron injury, ER stress

Organism: Rat

Tissue: Brain

Pathological State: Ischemia

86
Activation of Sirt1 protects from single-walled carbon nanotubes-induced pulmonary fibrosis by inhibiting alveolar macrophage senescence

X Zhang, W Zhao, X Hu, Y Shen, Y Gan, J Zou, Y Zhou, T Zhu, T Shen

Ecotoxicology and Environmental Safety (Elsevier) China , 07 July 2025

Pulmonology

Key words: Carbon nanotube, Silent information regulator 1, Alveolar macrophage, Senescence, Pulmonary fibrosis

Organism: Mouse

Tissue: Lung

Pathological State: Fibrosis

87
EMAP-II from macrophage-derived extracellular vesicles drives neutrophil extracellular traps formation via PI3K/AKT/mtROS in lung ischemia/reperfusion injury

H Zhuang, X Song, J Li, Z Li, S Wu, P Wang, H Shen, X He, Y Guo, Z Li, F Li

Redox Biology (Elsevier) China , 04 July 2025

Pulmonology

Key words: Lung ischemia/reperfusion injury, Extracellular vesicles, Neutrophil extracellular traps, EMAP-II, Mitochondrial ROS

Organism: Mouse

Tissue: Lung

Pathological State: Ischemia

88
MASTERARBEIT| MASTER'S THESIS

AK Kutay

Universität Wien (Universität Wien) Austria , 01 July 2025

Myology

Organism: Human

Tissue: Serum

89
Navigating Head and Neck Cancer: Advances in Diagnosis and Treatment

Z Dlamini

Oxford Acedemic (Oxford Acedemic) South Africa , 01 July 2025

Oncology

Key words: head and neck cancer, precision medicine, multidisciplinary care, epidemiology, healthcare disparities, biomarkers, predictive modeling, artificial intelligence, surgical innovations, global cancer inequalities

90
IDO1 promotes Echinococcus multilocularis infection by regulating the formation of neutrophil extracellular traps

H Zhang, R Meng, F Zhang, A Chen, H Ge, Z Li, Y Fu

Veterinary Research (BMC) China , 01 July 2025

Bacteriology

Key words: Echinococcus multilocularis, neutrophil extracellular traps, IDO1, NF-κB

Organism: Mouse

Tissue: Liver

Pathological State: Bacterial Infection

Results 81 - 90 of 3421

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