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Look through our StrataQuest Apps and get inspired by the variety of biomedical image analysis applications. If you cannot find the perfect solution for your research question please contact us. TissueGnostics offers the development of customized Apps for your specific analysis needs. Contact us for pricing details.

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Nuclei detection
Marker detection
Hi-Plex marker detection
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IF HI-PLEX 50
Original image
Tumor detection
Vessel detection
Combined detection
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IHC TUMOR VASCULARIZATION
Original image
Nuclei detection
Tumor detection
Proximity measurements: 0-25µm
Proximity measurements: 25-50µm
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IF IMMUNE STATUS IN SITU
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Tumor foci detection
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TUMOR FOCI
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Nuclei detection
Granuloma detection
Combined mask
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IF GRANULOMA
Original image
Nuclei detection
Tumor detection
Tumor cell detection
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IHC TUMOR-STROMA
Original Image
Marker-positive cell detection
Stroma/Tumor/Necrotic tissue detection
Combined detection
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IHC NECROTIC TUMOR
Original image
Glial cell detection
Combined mask
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IF GLIAL CELLS
Original image
Nuclei detection
Cytoskeleton detection
Dot detection
Cell detection
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IF CYTOSKELETON
Original image
Nuclei and marker detection
Dermis/Epidermis detection
Combined mask
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IHC MACROPHAGES
Original image
Nuclei detection
Bronchiole detection
Aveoli detection
Blood vessel detection
Combined mask
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PULMO
Original Image
Nuclei/cell detection
Red dot detection
Green dot detection
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RNA SCOPE+
Original image
Nuclei detection
Cell detection
Parasite detection
Combined mask
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IF LEISHMANIASIS
Original Image
Vessel and vessel surrounding detection
Elastin detection
Collagen detection
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IHC ANGIO ELASTIN
Original image
Nuclei detection
Glomeruli detection
Proximity measurements
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IF GLOMERULI
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Color separation
Membrane detection
Adipocyte detection
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IHC ADIPOCYTE
Original image
Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 2
Original image
Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 3
Original image
Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 4
Original image
Nuclei detection
Marker-positive cells
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IHC 2
Original image
Nuclei detection
Marker 1-positive cells
Marker 2-positive cells
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IHC 3
Original image
Bone detection
Bone marrow detection
Bone surface detection
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BONE VON KOSSA
Original Image
Lumen detection
Myofibre detection
Combined detection
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IF SKELETAL MUSCLE
Original Image
Tissue detection
Lipid droplet detection
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LIPID DROPLETS
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Bone detection
Osteoid detection
Combined detection
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BONE GOLDNER
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Pyknotic nuclei detection
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IF PYKNOTIC NUCLEI
Original Image
Blood vessel detection
Quantification
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IHC ANGIO DIAMETER
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Nuclei detection
Metastructure detection
Combined mask
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IHC META CELLS
Original Image
Rods and Cones detection
Marker-positive rods/cones detection
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IF RODS & CONES IN RETINA
Original Image
Vessel detection
Collagen detection
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ANGIO SIRIUS RED
Original Image
Vessel detection
Marker positive cell detection
Combined detection
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IHC ANGIO TRICHOME
Original Image
Nuclei detection
Cellular mask
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE
Original image
Nuclei and membrane detection
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IHC MEMBRANE
Original Image
Vessel detection
Stroma detection
Tumor detection
Tumor/Stroma/Vessel detection
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WILMS TUMOR
Original Image
Nuclei detection
Membrane detection
Nuclei & cytoplasm detection
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IF MEMBRANE
Original image
Cell body detection
Neutrite/dendrites detection
Combined detection
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IF NEURITE
Original image
Bone detection
Chondrocyte detection
Combined detection
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BONE MINERALIZATION
Original Image
Spheroid/Organoid detection
Nuclei detection
Dot detection
Nuclei/cytoplasm/membrane detection
Proximity measurement
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IF SPHEROIDS
Original Image
Villi detection
Crypt detection
Villi and dot detection
Crypt and dot detection
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IHC SMALL INTESTINE - DOTS
Original image
Nuclei detection
Dot marker 1 detection
Dot marker 2 detection
Combined masks
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IF DOTS
Original Image
Vessel detection
Necrotic tissue detection
Tumor detection
Combined detection
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IHC NECROTIC TUMOR ANGIO
Original image
Nuclei detection
Epidermis detection
Dermis detection
Combined mask
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IF SKIN MORPHOLOGY
Original Image
Filament detection mask
Filament detection
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IHC EXTRACELLULAR FILAMENTS
Original image
Nuclei and cell detection
Dot detection
Combined mask
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RNA SCOPE
Original Image
Nuclei detection
Dendrites detection
Axon detection
Dendrites and axon detection
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IF DENDRITES & AXONS
Original Image
Nuclei detection
Dot detection
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE DOTS
Original Image
Nuclei detection
EBER-ISH+ cells (pink)
Scatterplot
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EBER-ISH
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Gland detection
Vessel detection
Stroma detection
Combined detection
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ENDOMETRIUM HE
Original image
Nuclei detection
Cellular mask on Cy5
Cell-cell connections
Cell to cell contact
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IF CELLULAR MICROENVIRONMENT
Original image
Endothelial cell detection
Vessel lumen detection
Blood vessel detection
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IHC ANGIO
Original Image
Orignial image - high resolution
Vessel detection mask
Vessel detection on original image
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IF RETINAL VASCULARIZATION
Original Image
Soma detection
Branching point detection
Microglia detection
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IHC MICROGLIA
Original Image
Nuclei detection
Macrophage detection
Macrophage/Tumor detection
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IHC TUMOR MACROPHAGES
Original Image
Tumor detection
Vessel detection
Combined detection
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IF TUMOR VASCULARIZATION
Original Image
Nuclei detection
Cell detection
Dots detection
Filament detection
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IF CULTURED CELLS & SUBSTRUCTURES
Original Image
Nuclei detection
Tumor foci detection
Vessel detection
Vessel proximities
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IF TUMOR FOCI ANGIO
Original Image
Nuclei detection
Phenotype 1 & Phenotype 2 detection
Phenotype 1 to 2 proximity 0-5µm
Phenotype 1 to 2 direct contact
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IF CELLULAR CONTACT
Original Image
Insulin islet detection
Nuclei detection
Phenotype detection
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IHC INSULIN ISLETS
Original Image
Tumor and tissue detection
Nuclei detection
Phenotype detection
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IHC LUNG CANCER MOUSE
Original Image
Nuclei and cell detection
Astrocyte detection
Vessel detection
Brain region
Metastructure detection
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IF BRAIN
Original Image
Adipocyte detection
Adipocyte and cell cluster detection
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IHC ADIPOCYTES +
Original Image
Tumor/Stroma/lymphoid cluster detection
Nuclei detection
Proximity map tumor
Proximity map lymphoid cluster
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IHC IMMUNE STATUS IN SITU
Original Image
Tissue detection
Nuclei detection
Insulin Islet Detection
Phenotype identification
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IF INSULIN ISLETS
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Organoid detection
Classification by size
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ORGANOID
Original Image
Tissue classification
Nuclei detection
Mucin detection
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MUCIN SWISS ROLL
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Nuclei detection
Osteoclast detection
Combined detection
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IF Cell Culture - Osteoclast
Original Image
Tissue classification
Nuclei detection
Phenotype detection
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IHC SWISS ROLL
Original Image
Anatomical substructures
Detection of cells
Classification of vascular bundles
Spatial analysis
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YUCCA LEAF
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Anatomical substructures
Detection of cells
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PLANT ROOT
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Cell and nuclei detection
Gating based on cell sizes
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ONION
Original Image
Anatomical substructures
Detection of cells
Spatial analysis
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NERIUM LEAF
Original Image
Nuclei detection
Embryoid body detection
Phenotype segmentation
Phenotyping Scatterplot
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IF EMBRYOID BODIES
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Tissue classification
Nuclei detection
Phenotype detection
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IF SWISS ROLL
Original Image
Nuclei segmentation
Megakaryocyte identification
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IHC MEGAKARYOCYTES
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Detection of green dots
Detection of pink dots
Identification of colocalized dots
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IF DOTS COLOCALIZATION
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Nuclei detection
Astrocyte identification
Branches and branching points
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IF NEURONAL CELLS
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Nuclei detection
Proximity map of detected dots
Direction estimation of detected dots
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IF SPATIAL DOTS
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Cell detection
Cluster detection
Cluster gap detection
Combined detection
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STEM CELL COLONY ASSAY
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Detection of collagen type I
Detection of collagen type III
Overlapping of collagen type I and III
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SIRIUS RED POLARIZED
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Detection of big worms
Detection of small worms
Marker detection within worms
Combined detection
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IF C. ELEGANS
Original Image
Detection of nuclei
Detection of aveoli
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HE AVEOLI HAMSTER
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Detection of nuclei
Detection of dermis and epidermis
Detection of epidermis sublayers
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IF ARTIFICIAL SKIN

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TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

 

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