Checkpoint Molecules Predict Response to Immunotherapy in Cancer

FEATURED PUBLICATION

Checkpoint Molecules Predict Response to Immunotherapy in Cancer
cells

Heij et al. investigated the expression of checkpoint molecules in the tumor microenvironment of intrahepatic cholangio-carcinoma. They found that co-expression patterns of checkpoint molecules such as PD-L1 and TIGIT correlate with metastases and poor prognosis. TissueFAXS and StrataQuest were used to image the mIF-stained samples and assess protein expression.

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Community-developed Checklists Enhance Reproducibility of Microscopy Images

FEATURED PUBLICATION

Community-developed checklists for publishing images and image analyses
Nature Methods

QUAREP-LiMi is an initiative focused on promoting quality assessment and reproducibility for instruments and images in light microscopy. Dr. Rupert Ecker, CEO of TissueGnostics, participated in developing standardized guidelines for best practices in image communication. These checklists offer key recommendations on image formatting and annotation among others.

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AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma

FEATURED PUBLICATION

AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma
Cancer Biology & Medicine

To predict survival of patients with pancreatic adenocarcinoma, Zhou et al. performed an AI-assisted comprehensive analysis of CD8+ T cells, cancer stem cells (CSCs), and tumor budding (TB). They used StrataQuest image analysis software to automatically detect and quantify tumor-infiltrating CD8+ T cells, CD133+ CSCs, and CK19+ TB.

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Characterization of the Spatial Immune Context of Lung Cancer

FEATURED PUBLICATION

Characterization of the Spatial Immune Context of Lung Cancer
International Journal of Molecular Sciences

In a recent study, Imamura et al. investigated the role of debrin-expressing tumor infiltration lymphocytes (TIL) in lung cancer. The high-end image analysis solution, StrataQuest, was used for the automatic tissue classification and localization of CD3+/debrin+ cellular phenotypes in the tumor cell nest, as well as in the stroma.

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COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma

FEATURED PUBLICATION

COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma
Matrix Biology

Yan et al. investigated several collagen subtypes involved in pancreatic ductal adenocarcinoma desmoplasia. Based on this study, COL8A1 was suggested as a new marker for predicting poor chemotherapy responsiveness and survival. The TissueFAXS imaging platform and StrataQuest analysis solution were used to image and segment morphological structures.

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Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis

FEATURED PUBLICATION

Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis
cells

Savic et al. investigated the Erk 1/2 pathway role in ferroptosis induction by targeting xCT protein during the treatment of HNSCC. They found erastin to be a potent ferroptosis inducer which is strongly dependent on Erk 1/2 kinases. TissueFAXS and HistoQuest were used to image the IHC-stained samples and calculate the percentage of xCT-positive cells.

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Tumor Microenvironment Characterization of Rectal Cancer

FEATURED PUBLICATION

Case Report: Tumor Microenvironment Characterization of Rectal Cancer
Frontiers in Immunology

Song et al. published a case study investigating the genetics and tumor microenvironment of a rectal cancer patient with MSS/PD-L1-negative recurrent hepatopulmonary metastasis. TissueFAXS and StrataQuest were used to image stained tissue samples and to assess tumor infiltrating immune cells using, among others, CD4, CD8, CD163, PD1, and PD-L1 as markers.

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Adverse Effects of Single

FEATURED PUBLICATION

The impact of HIV infection on the frequencies, function, spatial localization and heterogeneity of TFRs within human lymph nodes
BMC Immunology

Mahlobo et al. published a study in BMC Immunology addressing the effect of HIV infections on frequencies, function, spatial localization and heterogeneity of T follicular regulatory cells (TFRs) in human lymph nodes. TFRs within lymph node tissues were quantified using TissueFAXS i PLUS and TissueQuest.

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Temporal changes

FEATURED PUBLICATION

Temporal changes in T cell subsets and expansion of cytotoxic CD4+ T cells in the lungs in severe COVID-19
Clinical Immunology

Kaneko et al. published a study in the Clinical Immunology journal focusing on the quantitative analysis of T-cell subset alterations in thoracic lymph nodes and lung samples of COVID-19 patients. With the help of TissueFAXS and StrataQuest, the authors were first to show the expansion of cytotoxic CD4+ T cells in the lungs of patients with severe COVID-19.

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Spatial Distribution

FEATURED PUBLICATION

Spatial distribution and functional analysis define the action pathway of Tim-3/Tim-3 ligands in tumor development
Molecular Therapy

In a recent publication in the journal Molecular Therapy, Wang et al (Cheeloo Medical College of Shandong University) combine multiplexing and TissueGnostics’ image cytometry solutions for the assessment of the expression level of Tim-3, a well-known immune checkpoint, in tumor infiltrating lymphocytes. This study nominates Tim-3 as a potential target for cancer immunotherapy.

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Multi-Antigen Imaging

FEATURED PUBLICATION

Multi-Antigen Imaging Reveals Inflammatory DC, ADAM17 and Neprilysin as Effectors in Keloid Formation
International Journal of Molecular Sciences

In a recent publication in the MDPI - International Journal of Molecular Sciences, Rath et al (University Hospital Heidelberg) combine multiplexing, TissueGnostics’ image cytometry and in-depth data mining to characterize the immune microenvironment including spatial relationships within keloid lesions. Using this approach, the authors were able to nominate potential therapeutic targets.

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SynNotch-CAR T

FEATURED PUBLICATION

SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma
Science Translational Medicine

A recent publication from the group of Choe et al. (University of California, UCSF) published in Science Translational research is exploring the therapeutic effectiveness of SynNotch-CAR T cells in a PDX glioblastoma mouse model. T cells in-situ were imaged/assessed by TissueFAXS and quantified via StrataQuest.

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CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer

FEATURED PUBLICATION

CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer
Acta Pharmaceutica Sinica B

Lin et al. investigated the UHRF1/DNMT1–MZF1 axis in the context of CpG methylation of protease serine 3, a protein with several isoforms that show paradoxical effects. To differentiate the isoforms, the researchers employed 7-marker multiplex staining and performed a quantitative analysis using TissueFAXS SPECTRA and StrataQuest.

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Customer Publications (A total of 3451 papers published)

Results 2181 - 2190 of 3451
2181
Promyelocytic leukemia zinc finger is involved in the formation of deep layer cortical neurons

HC Lin, YH Ching, CC Huang, PC Pao, WC Chang, TJ Kao, YC Lee

Journal of Biomedical Science (Springer) Taiwan , 26 April 2019

Neuroscience

Key words: Promyelocytic leukemia zinc finger, Plzf, luxoid mice, Cortical neuron

Organism: Mouse

Tissue: Brain

2182
Exercise Alleviates Osteoporosis in Rats with Mild Chronic Kidney Disease by Decreasing Sclerostin Production

HW Liao, TH Huang, YH Chang, HH Liou, YH Chou, YM Sue, PH Hung, YT Chang, PC Ho, KJ Tsai

International Journal of Molecular Sciences (MDPI) Taiwan , 25 April 2019

Osteology, Nephrology

Key words: exercise, chronic kidney disease, osteoporosis, sclerostin, chronic kidney disease–mineral bone disorder

Organism: Rat

Tissue: Bone

Pathological State: Kidney Disease

2183
Wound Age Estimation by Neutrophil Migration Distance.

QQ Liu, HM Guo, L Wang, HL Lu, QX Du, RF Bai, JH Sun, YY Wang

Fa yi xue za zhi (Europe PMC) China , 25 April 2019

Immunology

2184
Th2-TRMs maintain life-long allergic memory in experimental asthma in mice

B Bosnjak, S Kazemi, LM Altenburger, G Mokrovic, MM Epstein

Frontiers in Immunology (Frontiers Media S.A.) Austria , 24 April 2019

Immunology

Organism: Mouse

Tissue: Lung

Pathological State: Asthma

2185
YWHAE promotes proliferation, metastasis, and chemoresistance in breast cancer cells

YF Yang, YC Lee, YY Wang, CH Wang, MF Hou, SS Yuan

Kaohsiung Journal of Medical Sciences (Wiley) Taiwan , 18 April 2019

Oncology

Key words: 14‐3‐3ε, breast cancer, chemoresistance, YWHAE

Organism: Human

Tissue: Breast

Pathological State: Cancer

2186
Toll‑like receptor 4 plays a tumor‑suppressive role in cutaneous squamous cell carcinoma

E Mikami, M Kudo, R Ohashi, K Kawahara, Y Kawamoto, K Teduka, T Fujii, T Kitamura, S Kure, K Ishino, T Sakatani, R Wada, H Saeki, Z Naito

International Journal of Oncology (Spandidos Publications) Japan , 17 April 2019

Oncology

Key words: Toll-like receptor 4, cutaneous squamous cell carcinoma, differentiation, CD44, migration, invasion, filopodia

Organism: Human

Tissue: Skin

Pathological State: Cancer

2187
Functional CD3+ CD8+ PD-1-T cells accumulation and PD-L1 expression increases during tumor invasion in DCIS of the breast

S Lv, S Wang, G Qiao, X Wang, X Zhou, F Yan, Y Li, S Wang, MA Morse, A Hobeika, J Ren, HK Lyerly

Clinical Breast Cancer (Elsevier) China, USA , 16 April 2019

Oncology

Key words: DCIS, Opal technique PDl-1, PD-1, immune, microenvironment

Organism: Human

Tissue: Breast

Pathological State: Cancer

2188
Low cd8+ t cell infiltration and high pd-l1 expression are associated with level of cd44+/cd133+ cancer stem cells and predict an unfavorable prognosis in pancreatic cancer

YC Hou, YJ Chao, MH Hsieh, HL Tung, HC Wang, YS Shan

Cancers (MDPI) Taiwan , 15 April 2019

Oncology

Key words: pancreatic cancer, T cells, cancer stem cells, CD8, PD-L1, CD44, CD133, immunotherapy

Organism: Human

Tissue: Pancreas

Pathological State: Cancer

2189
Metastatic Colorectal Cancer Rewrites Metabolic Program Through a Glut3-YAP-dependent Signaling Circuit

CC Kuo, HH Ling, MC Chiang, CH Chung, WY Lee, CY Chu, YC Wu, CH Chen, YW Lai, IL Tsai, CH Cheng, CW Lin

Theranostics (Ivyspring) Taiwan , 13 April 2019

Oncology

Key words: cancer metabolism, colorectal cancer, glucose transporter, metastasis, YAP

Organism: Mouse

Tissue: Xenograft Tumor, Lung

Pathological State: Cancer

2190
Interrelations of Sphingolipid and Lysophosphatidate Signaling With Immune System in Ovarian Cancer

A Meshcheryakova, M Svoboda, M Jaritz, F Mungenast, M Salzmann, D Pils, D Cacsire Castillo-Tong, G Hager, A Wolf, EI Braicu, J Sehouli, S Lambrechts, I Vergote, S Mahner, P Birner, P Zimmermann, DN Brindley, G Heinze, R Zeillinger, D Mechtcheriakova

Computational and Structural Biotechnology Journal (Elsevier) Austria, Germany, Belgium, Switzerland, Canada , 10 April 2019

Oncology

Key words: Sphingolipid/lysophosphatidate system, On-site immune response, Patient-specific expression data sets, Integrative analysis algorithm, Patient stratification, From systems biology to systems medicine

Organism: Human

Tissue: Ovaries

Pathological State: Cancer

Results 2181 - 2190 of 3451

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